Nolan Lab: Pioneering Single-Cell Analysis & Spatial Biology
We focus on signaling in the immune system and study of oncogenic process. We use multiparametric single-cell analysis to study hematopoiesis, cancer and leukemia, autoimmunity and inflammation. We also develop computational approaches for network and systems immunology. Our most recent efforts are focused on a single cell analysis advance using a mass spectrometry-flow cytometry hybrid device, the so-called “CyTOF”. The approach uses an advanced ion plasma source to determine the levels of tagged reagents bound to cells—enabling a vast increase in the number of parameters that can be measured per cell. Our laboratory has already begun a large-scale mapping of the hematopoietic hierarchy in healthy human bone marrow at an unprecedented level of detail. We are working to enable a deeper understanding not only of normal immune function, but also detailed substructures of leukemias and solid cancers as well as autoimmunity and pathogen effects upon the immune system.
Key Technologies
CODEX multiplexed imaging, MIBI spatial proteomics, and CyTOF mass cytometry platforms.
Lab Members
Current team and alumni: postdocs, graduate students, and research staff.
Software & Tools
Open-source tools for single-cell data analysis: CODEX, Citrus, SPADE, and more.
Resources & Protocols
CyTOF training materials, experimental protocols, Cytobank datasets, and method papers.
CyTOF Protocols
Standard operating procedures for instrument maintenance, sample prep, and staining.
About the Lab
Our mission, research focus, and history at Stanford University.